Insertion junction: CLIP2.043511_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.043511
Chromosome:chromosome 2
Location:3523632
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g099100 (1 of 3) K10587 - ubiquitin-protein ligase E3 A (UBE3A, E6AP); RCC-type HECT ubiquitin ligase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATACCACTAGACCAAACTCCCTTCGGAAGCGTGGCCGATTCAAGAGCCA
Internal bar code:TTTTAATTGACAGAGACTTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1158
LEAP-Seq percent confirming:65.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CACTGTGCGTGTTCTGTGTG
Suggested primer 2:ATGCGTCTTGAGGCTTCACA