Insertion junction: CLIP2.043511_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.043511
Chromosome:chromosome 2
Location:3523657
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g099100 (1 of 3) K10587 - ubiquitin-protein ligase E3 A (UBE3A, E6AP); RCC-type HECT ubiquitin ligase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCGAGAGGTCGTGGGTTCAATTCCCGCAACTCCCCCGTCCTTTTGGAC
Internal bar code:TTTTAATTGACAGAGACTTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1900
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCGTCTTGAGGCTTCACA
Suggested primer 2:CACTGTGCGTGTTCTGTGTG