Insertion junction: CLIP2.043515_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.043515
Chromosome:chromosome 3
Location:3430805
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g166850 (1 of 1) PTHR10887//PTHR10887:SF323 - DNA2/NAM7 HELICASE FAMILY // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACTTCCAGCCGCGCCCGCTGCGGGTCGTCCGCCAGGTGGGGCATGCTG
Internal bar code:GTTGGTACCAGGAGGAACTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:202
LEAP-Seq percent confirming:46.1538
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTTCTGTGCTCTGCGTTA
Suggested primer 2:TACACACACGGACCTTGAGC