Insertion junction: CLIP2.043518_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.043518
Chromosome:chromosome 1
Location:7573102
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g053150 GPDH3,GPD3 (1 of 3) K00006 - glycerol-3-phosphate dehydrogenase (NAD+) (GPD1); Glycerol-3-phosphate dehydrogenase/dihydroxyacetone-3-phosphate reductase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCAAATCACGAACCCATGCAAAGCACAAGCAATCAAGCACAATGGCAC
Internal bar code:AGTTTCGTGTCCGCTACGCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:761
LEAP-Seq percent confirming:22.8571
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CATTTTCGCACCTCCCCTCT
Suggested primer 2:CTTGGAGTTGGGTCCCATCC