Insertion junction: CLIP2.043519_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.043519
Chromosome:chromosome 12
Location:6962838
Confidence (%):63
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00238261

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCTTGGTAGCTTTGCGACACGTAGCATCGCACCTCTGCCTGGCCGCCC
Internal bar code:AAGAGTCAAATGCGACGGCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:69
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CGTATACGTTACGGGTGGGG
Suggested primer 2:GGACTCGCGCATCACTTTTC