Insertion junction: CLIP2.043520_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.043520
Chromosome:chromosome 17
Location:1765955
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g708850 (1 of 226) IPR012337 - Ribonuclease H-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATGCAATTTTGGTTATTCGTCAGCTTTTGCTGTTTTCTGCTGCCCTGC
Internal bar code:AGGTACGAGGGCAGTACGCCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3800
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CTAGCAACCCTAGCTGGCTC
Suggested primer 2:CCAACAGTGATTTGCTGGGC