Insertion junction: CLIP2.043526_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.043526
Chromosome:chromosome 12
Location:7046837
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g560400 DNJ16 (1 of 1) PTHR24078:SF319 - DNAJ HOMOLOG SUBFAMILY C MEMBER 16; DnaJ-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGAGGAAAGCGGAGTGGGAGTCGGAAGTGGGCGGATAAGGAGGCCAGC
Internal bar code:AGCCAGCACGACAGTGTACCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:777
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCCCGCGTGTTCTTAGCT
Suggested primer 2:GAGCAGCACATACACATGCG