Insertion junction: CLIP2.043528_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.043528
Chromosome:chromosome 9
Location:1200580
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400950 NCT2 (1 of 2) PTHR11662:SF3 - INNER MEMBRANE TRANSPORT PROTEIN RHMT; High-affinity nicotinic acid transporter intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCTGCCCACACACGCACAGCCCCCCCAAACCCCAACCCAACCCCGAC
Internal bar code:TCTTTTGCGGGTCTGGGACCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2956
LEAP-Seq percent confirming:67.3469
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:TTCACACGGACGTTGACGAT
Suggested primer 2:CGATGCAACAACGTGTGTGT