Insertion junction: CLIP2.043532_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.043532
Chromosome:chromosome 14
Location:3055251
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g628000 TMX1 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; (1 of 1) 2.1.1.61//2.8.1.4//2.8.1.7 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase // tRNA sulfurtransferase // Cysteine desulfurase / Cysteine desulfurylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGTGGTGGTGTGTTTGCTTGATTGGCGAGTTCGGGGAGTTTGATGATG
Internal bar code:ACGGTGCCAGTTCCCCATACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:785
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CTAAGAAGGGGTTGGCAGGG
Suggested primer 2:AACATGACCCTCGACAGCTG