Insertion junction: CLIP2.043533_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.043533
Chromosome:chromosome 16
Location:7047999
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g674403 (1 of 30) PTHR24349:SF79 - NITROGEN NETWORK KINASE 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCATACTGGCATGCCAAGGGAGTCAGGGTGGAATGCATTCGGGTGGGC
Internal bar code:GATAGGATAGGTTGGCTTGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:781
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AATCGCCAGTCCTGCATGAA
Suggested primer 2:GGGTTGCCGGTATGTCTCAA