Insertion junction: CLIP2.043539_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.043539
Chromosome:chromosome 1
Location:5223082
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g036550 ERV14 (1 of 1) PTHR12290:SF11 - PROTEIN CORNICHON; Cornichon-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCTCCGCACCGCGCAGTGACTCCTCCGCCGCCGCTAACCATCATCGTT
Internal bar code:TACTATTAGATGCCGATTGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1317
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TAGAATGGCAGGAGGGCTCT
Suggested primer 2:AGAACAAGAGGAACGAGCCG