Insertion junction: CLIP2.043539_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.043539
Chromosome:chromosome 1
Location:5223086
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g036550 ERV14 (1 of 1) PTHR12290:SF11 - PROTEIN CORNICHON; Cornichon-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTGCCCTGTGTGTCACCAGTTGTGTGGGGAGGTGGGCAGCTGGAAGAG
Internal bar code:CCATGAAAAGAGACACGGTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:3073
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:AGAACAAGAGGAACGAGCCG
Suggested primer 2:TAGAATGGCAGGAGGGCTCT