Insertion junction: CLIP2.043547_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.043547
Chromosome:chromosome 2
Location:226419
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800153 intron
Cre02.g800155 CDS
lncRNA_TCONS_00054465 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACAACCAGCCTCCAACACAATGCTCACCCACTTTTTGCTGAAACACAA
Internal bar code:CCCTATTTCGCTAACTAGTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3439
LEAP-Seq percent confirming:95.7447
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:GTTACCGCTTACAGCCACCT
Suggested primer 2:TGTAGCAACCCCCGAGGATA