Insertion junction: CLIP2.043549_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.043549
Chromosome:chromosome 17
Location:3706277
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g725950 CSR13 (1 of 3) K08106 - N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase (CHST15); Carbohydrate sulfotransferase-related 13 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCTCTGCCTCTCCGACCGCAACTCAACACCCACATAGGTCCAGACTGA
Internal bar code:TGACCATTGTGAGATGTACATT

Confirmation - LEAP-Seq

LEAP-Seq distance:521
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCACTGCCCGGTTTAGTT
Suggested primer 2:GGACGTGAGAAGGGGAAGTG