Insertion junction: CLIP2.043558_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.043558
Chromosome:chromosome 6
Location:5388614
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCGAGCCGGTCACGAATCCGTGCCCAGTCTACCTTGTCTGAAAGTGTG
Internal bar code:GGGCGTATCTGACGAATACTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1282
LEAP-Seq percent confirming:73.3333
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCCAAGTTGCGTTCTTCG
Suggested primer 2:CATCAAGCGCGACAAGTAGC