Insertion junction: CLIP2.043558_5

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.043558
Chromosome:chromosome 8
Location:337176
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358572 (1 of 5) PF03094 - Mlo family (Mlo) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCTTTGAATATACCGGTGCCTGGGAGGCTTGGAAGTACAAGGAGAGCA
Internal bar code:TCTAATAGTAGCGACTGGATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:354
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGGGGACATCAGAGCAAA
Suggested primer 2:TCGGAAGTGGGGATGAGCTA