Insertion junction: CLIP2.043558_6

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.043558
Chromosome:chromosome 8
Location:337181
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358572 (1 of 5) PF03094 - Mlo family (Mlo) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTCTCAGGCATCTTGCAGCCCTGGGCCCGGGGCCACCAGGTCATAGCG
Internal bar code:TAAATTGCCTTTACGACCGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1250
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TCGGAAGTGGGGATGAGCTA
Suggested primer 2:GTGGGGGACATCAGAGCAAA