Insertion junction: CLIP2.043560_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.043560
Chromosome:chromosome 3
Location:1776950
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g153850 (1 of 10) PTHR31867:SF1 - EXPANSIN-A1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTTTGGTAACCGCCTACGCACGCAAGCCCCAGTCAGACCTTAGCCCGC
Internal bar code:GGTCCCATTAGGAGTTTGCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:3983
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGCACTCATACTTGGCCC
Suggested primer 2:CATGACATGATGTGCAGGCG