Insertion junction: CLIP2.043568_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.043568
Chromosome:chromosome 10
Location:2088430
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g432950 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGATCTCCGAGCCATCCAGCCAGTCCACGATGTGGGTTTGCCCGGCGCGG
Internal bar code:TTTTACCCAGGGATCTGCGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1231
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AGGATTCCGACATGTTGCGT
Suggested primer 2:ACGACCCGGTCAAAGACATC