Insertion junction: CLIP2.043571_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.043571
Chromosome:chromosome 16
Location:4804959
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g687600 (1 of 7) IPR000104//IPR020683 - Antifreeze protein, type I // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTTGCACGCAGACACAGGCACCCCGTTGCAGGCGCTCACTTCGTGCAT
Internal bar code:AAACGTCTTTGCGCAATGTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2420
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCAAGCAAGCTTTTGGAG
Suggested primer 2:CTGGGAAGCTGGGGTAACAG