Insertion junction: CLIP2.043575_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.043575
Chromosome:chromosome 8
Location:3053411
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g375350 SDR12 (1 of 2) K19329 - WW domain-containing oxidoreductase (WWOX); Short-chain dehydrogenase/reductase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCATCGAGGATTGGGCGGGAGCTTGGACTTAGCGGCCAGGAGTAGCGGC
Internal bar code:GTGTCCTCAGGACGAACTTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1777
LEAP-Seq percent confirming:43.3333
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGTGTGCGTGTGTGTAT
Suggested primer 2:TGTCCTTGCAGGGTGGTTTT