Insertion junction: CLIP2.043582_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.043582
Chromosome:chromosome 2
Location:2233484
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g089850 (1 of 1) IPR000969//IPR013719 - Structure-specific recognition protein // Domain of unknown function DUF1747 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAGGAGGCTCCAGCGCCTGCACTGTGGCTGTCCTCACCGCTCCAGCAC
Internal bar code:TCGTTCTCGTGTCGTCGTGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1253
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CAACGCCAAGTCAAGTGTGG
Suggested primer 2:TTCGGGGAGTTTCAGTGTCG