Insertion junction: CLIP2.043583_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.043583
Chromosome:chromosome 7
Location:3574515
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g336700 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCTAGTTTGATGCTTTGACTGTTGATGACCACCATCACTAACCAACAT
Internal bar code:ACTATGTTTGGTTCGTCATGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5030
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CCACAACCTGCCTCTCAGAG
Suggested primer 2:CCCAGTTGCCGTTTTGAAGG