Insertion junction: CLIP2.043584_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.043584
Chromosome:chromosome 3
Location:928541
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g146627 (1 of 1) PTHR20852:SF16 - TYPE-1 GLUTAMINE SYNTHETASE 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTGTAACCCCACACCCGGGGTACTTCTCTGTACCAATCCTTGCACCCA
Internal bar code:TGTCGTCACCTGTCCGCTGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1074
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCCTACTTCCTCCTCCCT
Suggested primer 2:TGTCTGCGTGCATGTGTTTG