Insertion junction: CLIP2.043592_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.043592
Chromosome:chromosome 2
Location:4795925
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g108950 LF1 Long Flagella protein 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCCGCTGTTGGCTCGCTGCAGCATCGCCGCCGCGGCCGCGGCCGTTGA
Internal bar code:CAGCTCTGTGATTCAGATTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:624
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCCAATGCTGTCATTAGC
Suggested primer 2:GACGACCGACCCTGAACTTT