Insertion junction: CLIP2.043596_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.043596
Chromosome:chromosome 6
Location:7309296
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g299450 3'UTR_intron
Cre06.g800733 (1 of 1) PTHR10072:SF48 - IRON-SULFUR ASSEMBLY PROTEIN ISCA, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTCATAGACTCATACACACAATAAGACACAGCTAGGGGCAGGAGCCAC
Internal bar code:ACTGTACGGCCTGCTAAGAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:3704
LEAP-Seq percent confirming:95.1613
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTTTCCAGCCGAGTTTGC
Suggested primer 2:TTCCCTACACGCCAAAGGAC