Insertion junction: CLIP2.043604_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.043604
Chromosome:chromosome 10
Location:5260520
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g456400 DAT1 (1 of 1) PTHR11958//PTHR11958:SF63 - SODIUM/DICARBOXYLATE SYMPORTER-RELATED // EXCITATORY AMINO ACID TRANSPORTER 2, ISOFORM C; Dicarboxylate/amino acid cation sodium transporter intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATTAGGTTCTGCGTGTGACGGGGGCCGCAGCTCCCTATCCGGCTCTCAG
Internal bar code:AGAGAGGTTCTCTAGTTTCCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4162
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGCCGGAGAGGACAAAAA
Suggested primer 2:CATAATCAGGGCGGCGTTTG