Insertion junction: CLIP2.043611_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.043611
Chromosome:chromosome 14
Location:3942319
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g632847 ELG44 Exostosin-like glycosyltransferase 44; (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCGCGGCTTCTGCCACTGCAGGTGAGCGCGGGTTGCGGAAGCTGTGT
Internal bar code:GCCCAAATAAAGTCACGTTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:524
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ATACACAGTCAAGGCACGCA
Suggested primer 2:ACACACACACACACACACCT