Insertion junction: CLIP2.043612_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.043612
Chromosome:chromosome 5
Location:535807
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g244300 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGGCGGACGCCTTTGGCGTATTGGCACCCGTCTGCCGCGCAGGAGCCG
Internal bar code:CTCTCCGAGTTTTGCATAGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1873
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCAGGCAAATGAGTCAC
Suggested primer 2:CAACCGTCTCGTCGTCATCA