Insertion junction: CLIP2.043621_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.043621
Chromosome:chromosome 2
Location:3443406
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g098750 (1 of 7) PF00027//PF00520 - Cyclic nucleotide-binding domain (cNMP_binding) // Ion transport protein (Ion_trans) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATCGTCCTCGTGTGGAGCCATGGACCGACATAGAGCACCTGGGGTTCCA
Internal bar code:CTTGCTATATGGGCGTAACAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1482
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCCCTCCACATAAGCCTA
Suggested primer 2:CTCATACTTGCACCTGCCCA