Insertion junction: CLIP2.043629_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.043629
Chromosome:chromosome 6
Location:6611538
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g294650 AGT1 Alanine-glyoxylate transaminase; (1 of 2) K00830 - alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase (AGXT) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGGTGCAACTGTAGAGGCGTGGCAGCATTGGTGGGGAGGGGAACCGGA
Internal bar code:GTCAGAAAATTGACAACGAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1132
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCTAAGCTCGCTATCCCG
Suggested primer 2:CCGTTTGTGGAGAAGGACGA