Insertion junction: CLIP2.043629_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.043629
Chromosome:chromosome 6
Location:6611540
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g294650 AGT1 Alanine-glyoxylate transaminase; (1 of 2) K00830 - alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase (AGXT) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTAGCCCCCGGCACCGCGCCCTGCCAGCCAGCGGTTGGCTGGCCGCAC
Internal bar code:GTCAGAAAATTGACAACGAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:806
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTTTGTGGAGAAGGACGA
Suggested primer 2:TTGCTAAGCTCGCTATCCCG