Insertion junction: CLIP2.043635_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.043635
Chromosome:chromosome 8
Location:832804
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g361150 GT90F11,GT90-11 GT90 family protein 11; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGTACTCGATCCAGGGGGAGCGCTCCCGCAGCACCACACTGTTGGTCT
Internal bar code:TCCGACGGCAAGACTTGGTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:325
LEAP-Seq percent confirming:45.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCCGGGCAAATATCATG
Suggested primer 2:ATTGGGGATGCGGTTTGGAT