Insertion junction: CLIP2.043636_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.043636
Chromosome:chromosome 13
Location:2387581
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g579250 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCGTCATCCACAGTCGTTGGGCGCTCCTCGCGCCAGAGCACATCCATC
Internal bar code:GACTACAACGATGCCGTTAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4824
LEAP-Seq percent confirming:62.2222
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGCCACCGATATCACAG
Suggested primer 2:GTGCTGCAACATTAGCTCGG