Insertion junction: CLIP2.043651_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.043651
Chromosome:chromosome 15
Location:1307690
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g641000 NUP50 Nucleoporin 50; (1 of 2) PF00638 - RanBP1 domain (Ran_BP1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATATGTGTTTGTGTGCGTGCGTGCGCATGTTCCTTTCGTGAATCGGCGG
Internal bar code:ATTATCTTGATATCATGCGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:250
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACCTCTACACGCACAG
Suggested primer 2:TTTGCCACGCATTTACAGCC