Insertion junction: CLIP2.043657_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.043657
Chromosome:chromosome 3
Location:1754985
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g153600 (1 of 1) IPR000104//IPR003034//IPR022656 - Antifreeze protein, type I // SAP domain // XPA C- terminal intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTCTGAAGTTACTGGTTTTCGGAGGCAGGGATGAGTGGGCCAGGGGGG
Internal bar code:GATAGGGGGTTGTAGTAATGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:575
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CACATGCAACACAAGCGGAA
Suggested primer 2:TTCACCATGTTTTGCCGCTG