Insertion junction: CLIP2.043658_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.043658
Chromosome:chromosome 8
Location:2090224
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g369400 (1 of 1) PTHR12356:SF18 - NUDC DOMAIN-CONTAINING PROTEIN 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCACAGCCTGCCGGCAGCGCACCGTACACGCCACGGCCGCTGCCTCCT
Internal bar code:TACAGTCAGGCTGTGTGCGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:252
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGCGTATTGGTTTGGGGA
Suggested primer 2:GGCGCTGCAGATTCTTTAGC