Insertion junction: CLIP2.043659_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.043659
Chromosome:chromosome 9
Location:5544425
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00156899

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGCTTCTGGCCCCAGCGATGACCGCGAGCGAAAGAAAAGAACTGTCCA
Internal bar code:CGGCGCGTTTCAGCATACACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3810
LEAP-Seq percent confirming:88.5714
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTGGAAACCCTACACGAA
Suggested primer 2:CGGCAGCATTTCATACCAGC