Insertion junction: CLIP2.043660_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.043660
Chromosome:plastome
Location:199825
Confidence (%):80
Locus systematic id Locus common name Defline Feature
CreCp.g802335 rpoC1,ChreCp069,2717049 (1 of 2) K03046 - DNA-directed RNA polymerase subunit beta' (rpoC); RNA polymerase beta' chain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTAGAAAATTCATTTAGAGGTCGTCAATTATTACCTGTCTCACCATCA
Internal bar code:ATGAGTGTTACCGATGCTACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1255
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTGCAGGCCATCCATTTT
Suggested primer 2:CAAGCACAGCTCGCTCTTTC