Insertion junction: CLIP2.043667_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.043667
Chromosome:chromosome 1
Location:6134115
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g043550 (1 of 3) IPR000104//IPR004333 - Antifreeze protein, type I // Transcription factor, SBP-box intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCAGCGACGAGCCGCCACAACAGAAGGCACTTTTGCGTGTGGATATT
Internal bar code:AGCCCGTCCTTCTGAACCTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2187
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AGACAACCAATGCGGCACTA
Suggested primer 2:AAACCTGTGACCATTTGCGC