Insertion junction: CLIP2.043667_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.043667
Chromosome:chromosome 1
Location:6134125
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g043550 (1 of 3) IPR000104//IPR004333 - Antifreeze protein, type I // Transcription factor, SBP-box intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGACCATCCCTCACCCGACAGCCGCCTGGGACGGAAGATTCTGCTGCC
Internal bar code:AAGCTCTTCTTCATATAGGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:5533
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:AAACCTGTGACCATTTGCGC
Suggested primer 2:AGACAACCAATGCGGCACTA