Insertion junction: CLIP2.043673_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.043673
Chromosome:chromosome 4
Location:2506547
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g222200 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCCCACACAGCTGACGCCGCCGCAGCCAGGCGTCAACCCCGTCGAGC
Internal bar code:TAGGCGTTGTCTTAGCATTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3176
LEAP-Seq percent confirming:63.3333
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGACTACGGTTTCCACGG
Suggested primer 2:CTCTCTGGCTCTGAGACCCT