Insertion junction: CLIP2.043685_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.043685
Chromosome:chromosome 17
Location:5483532
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g739150 CTPA5,TSP5 (1 of 8) 3.4.21.102 - C-terminal processing peptidase / Tsp protease; putative C-terminal peptidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGAGCACAGGCAGAGGCATTAGCTGCAAGCGGTAATACTTATGGGAGCA
Internal bar code:GTAGCATGTGTAGATCGAGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:924
LEAP-Seq percent confirming:48.2759
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:ATCGGACTCACCCTAGCCTT
Suggested primer 2:TGGGAGGTGTAGGGTAGACG