Insertion junction: CLIP2.043685_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.043685
Chromosome:chromosome 17
Location:5483533
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g739150 CTPA5,TSP5 (1 of 8) 3.4.21.102 - C-terminal processing peptidase / Tsp protease; putative C-terminal peptidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGACATTAACTTGGTTTGGTTTAGTTTGGGCTGGTTATACAACCCCCAA
Internal bar code:GTAGCATGTGTAGATCGAGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:63
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGAGGTGTAGGGTAGACG
Suggested primer 2:ATCGGACTCACCCTAGCCTT