Insertion junction: CLIP2.043690_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.043690
Chromosome:chromosome 2
Location:3362046
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g098150 XYK1 (1 of 1) 2.7.1.17 - Xylulokinase / Xylulose kinase; Xylulose kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAAGAACGGGTGCCTCCAAACCAGGGCTTGGGGCAGGCCCAGCAAGCCG
Internal bar code:CTGTTACCGGTAAGCATTCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1740
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAAATGCACAGCACAGAA
Suggested primer 2:CCCACTTGTACCACCATCCC