Insertion junction: CLIP2.043692_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.043692
Chromosome:chromosome 5
Location:3183981
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g232100 (1 of 17) IPR001305 - Heat shock protein DnaJ, cysteine-rich domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTCGTCCTGCCCTGTGCACCCCTCCCACATGTCCCCCCCCCGTCCTCT
Internal bar code:GTTGTTGATGTTCGTTAAAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1069
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGCACGGGACTAAGGGAT
Suggested primer 2:CTCACGCAGAGGCTAGCTAC