Insertion junction: CLIP2.043695_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.043695
Chromosome:chromosome 17
Location:4892626
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g735021 (1 of 6) PTHR10582 - TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGAAAAATGTGGAGTCGGAGGGCATCGATCCCCCTACCTCCCGCAGATT
Internal bar code:TGCGGAGGTGTGCGGGGTTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:939
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGTCCCTCATTGGCCAT
Suggested primer 2:GTACATGTGTGCGTGCGTAC