Insertion junction: CLIP2.043696_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.043696
Chromosome:chromosome 2
Location:8447968
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g142353 TSH1 (1 of 1) IPR013320//IPR013806 - Concanavalin A-like lectin/glucanase domain // Kringle-like fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGGTGGGGGGGGGATGCGGCGGGGTGCAGCCTGGCAGGAGCCCCTGGC
Internal bar code:GAAACCAGGAGTTGATGGCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1487
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CACTGGAGGCGTCACTGTAG
Suggested primer 2:GCTTTGTGCTCTGAGCTTCG