Insertion junction: CLIP2.043698_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.043698
Chromosome:chromosome 3
Location:8085386
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201150 (1 of 2) 2.5.1.117 - Homogentisate solanesyltransferase / HST intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCCGTGCACTCCGCCGCTCCTCCGCATTGGCAGCGCTCACACGCACA
Internal bar code:CGGGAGCATGTGTGGCGGTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:600
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGGGACTCAGCACCGTAC
Suggested primer 2:CAGGTCATGAATGGCAGGGT