Insertion junction: CLIP2.043700_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.043700
Chromosome:chromosome 6
Location:7021521
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g297250 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGGAGGAGTCGAGGGTGTGGGACGGGAGCGCGGTCGTCACGGTGGTAA
Internal bar code:GGTACCTTTCCTTTATTGCCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1722
LEAP-Seq percent confirming:8.33333
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGATCACTGCGGAAATTC
Suggested primer 2:TTCTTGCGCAAACTGAAGGC